DEPCODDEtection of Phylogenetically COrrelated Domains


Select the query organism:


Enter the name of the query domain, and the number of domains to display as hits

To get started with an example, simply click "Submit"



Alternatively, you may provide an amino acid sequence as a query

or

Click here to load an example. Then, click "Submit"

 
Organism: Homo sapiens
 
Query: ACTB__Actin



REFERENCES:

Ji, F., Bonilla, G., Krykbaev, R., Ruvkun, G., Tabach, Y., & Sadreyev, R. I. (2022). DEPCOD: a tool to detect and visualize co-evolution of protein domains. Nucleic Acids Research, 50(W1), W246-W253.


Sadreyev et al. (2015) PhyloGene server for identification and visualization of co-evolving proteins using normalized phylogenetic profiles. Nucleic Acids Res. 43(W1):W154-9


Tabach et al. (2013) Identification of small RNA pathway genes using patterns of phylogenetic conservation and divergence. Nature 493(7434):694-8