Table 4.Unique (non-repetitive) TAMU BAC clones identified by hybridization to the SIA YAC probes. The repetitive clones in Table 3 and then those from the ATGC web site (29.Jan.97 data set) were subtracted from the data in Table 2. BAC names are listed alphabetically in the left hand column in groups. Under each YAC SIA probe heading the BACs uniquely identified by a particular YAC SIA probe are grouped first followed by the BACs in common with the adjacent YAC. The data analysis and table preparation was facilitated by use of ACEDB software tools. The layout of the table is as follows: the six YACs used as SIA probes head the six sets of double columns; a "+" sign under sub-column labeled "GRID" indicates a positive signal, a "-" sign a negative signal on the grids and a blank indicates that the YAC SIA probe was not used on the grid filters containing those BACs; the next sub-column labeled "S" contains the Southern data. The BAC grids giving rise to the hybridization data were subjectively rescored to pick only the "strongly positive" BACs for Southern blot analysis. A "+" sign indicates that that BAC was used for Southern blot analysis and hybridized to the YAC SIA probe, a "-" sign indicates that that BAC was used for Southern blot analysis and did not hybridize to the YAC SIA probe, and "NO DNA" indicates that that BAC was used for Southern blot analysis but that the stained gel showed an absense of DNA in that lane. A blank indicates that that BAC was not used for Southern blot analysis. BACs that overlap two adjacent YACs are positioned between them in the list and can be identified by "+" symbols in two adjacent "S" sub-columns.
CIC10A06 CIC11C08 EG05C12 EW16G04 CIC10F02 CIC02E07 GRID S GRID S GRID S GRID S GRID S GRID S T01P05 + + - - - - - T02C16 + + - - - - - T03A06 + + - - - - - T03G21 + + - - - - - T04J10 + - - - - - T04M24 + + - - - - - T05A21 + - - - - - T05I07 + + - - - - - T05K16 + - - - - - T06E02 + + - - - - - T07M07 + + - - - - - T08A21 + - - - - - T08L16 + + - - - - - T09A03 + - - - - - T09A24 + - - - - - T09B02 + - - - - - T09C02 + - - - - - T09D02 + - - - - - T09E02 + - - - - - T09J01 + - - - - - T09L20 + + - - - - - T10A24 + - - - - - T10C01 + - - - - - T10L24 + - - - - - T11A02 + - - - - - T11A03 + - - - - - T11A24 + - - - - - T11B02 + - - - - - T11C02 + - - - - - T13K10 + - - - T14J19 + + - - - T14K19 + + - - - T15K10 + - - - T16O21 + + - - - T17I16 + - - - T18D16 + - - - T18H19 + - - - T19H14 + - - - T21M03 + + - - - T22B03 + + - - - T22G02 + - - - T22G14 + + - - - T22K21 + + - - - T24I17 + - - - T24J14 + - - - T28J03 + - - - T28M21 + + - - - T29F06 + - - - T29M21 + NO DNA - - - T29O13 + - - - T30H02 + + - - - T31A13 + - - - T02P04 + + + + - - - - T03B18 + + - - - - T04J14 + + - - - - T04M15 + + + + - - - - T04M17 + + + + - - - - T06N13 + + + + - - - - T07D17 + + + + - - - - T09G14 + + + + - - - - T09K11 + + + + - - - - T10A11 + + - - - - T13F03 + NO DNA + + - - T16B22 + + - - T16I19 + + + + - - T18O05 + + + - - T24N03 + + + + - - T28G01 + + - - T29C14 + + - - T32C19 + + - - T32K17 + + + + - - T01E06 - + - - - - T01F04 - + - - - - T01F10 - + + - - - - T01I19 - + - - - - T01K18 - + + - - - - T01L22 - + - - - - T02L02 - + + - - - - T03H21 - + - - - - T03K09 - + + - - - - T03L20 - + + - - - - T03N19 - + + - - - - T04B01 - + - - - - T04B02 - + - - - - T04C08 - + - - - - T04D23 - + - - - - T04K01 - + + - - - - T05C08 - + - - - - T05D20 - + - - - - T05E05 - + - - - - T05F12 - + - - - - T05G17 - + - - - - T05P22 - + - - - - T06A23 - + + - - - - T06C12 - + - - - - T06H14 - + - - - - T06P02 - + + - - - - T07A09 - + - - - - T07F06 - + + - - - - T07I16 - + + - - - - T07K18 - + + - - - - T07K19 - + + - - - - T08B01 - + + - - - - T08H02 - + - - - - T08K24 - + + - - - - T08P21 - + - - - - T09D20 - + + - - - - T09E05 - + + - - - - T09L11 - + + - - - - T10F20 - + - - - - T13F10 - + + - - T13H19 - + + - - T13I01 - + + - - T13I22 - + - - T14A15 - + - - T14G07 - + + - - T15H09 - + + - - T16D24 - - + + - - T17B17 - + - - T17H13 - + - - - T17H19 - + + - - T17I17 - + - - T17K18 - + - - T17M04 - + - - T17N06 - + - - T18B21 - + - - T18C02 - + - - T18C07 - + - - T18C11 - + - - T18C12 - + - - T18D20 - + - - T18M04 - + - - T19A06 - + - - T19A15 - + + - - T19A22 - + + - - T19B04 - + - - T19B17 - + - - T19C21 - + + - - T19D13 - + - - T19D17 - + - - T19H13 - + - - - T19J19 - + - - T20B05 - + + - - T20B07 - + - - T20C02 - + - - T20C11 - + - - - T20D09 - + - - T20D10 - + - - - T20D20 - + - - T20E07 - + - - - T20E12 - + - - - T20F15 - + + - - T20H05 - + - - T20I11 - + - - T20M14 - + + - - T20N09 - + - - T20O11 - + - - T21B07 - + - - T21B17 - + - - T21D04 - + - - T21E07 - + - - T21E12 - + - - T21F06 - + - - T21G06 - + - - - T21I20 - + + - - T21J06 - + + - - T21J07 - + - - T21M05 - + - - T22F06 - + - - T22K19 - + - - T22K22 - + + - - T22K23 - + + - - T23A08 - + - - T23B07 - + - - T23B17 - + - - T23D09 - + - - T23F06 - + - - T23I06 - + - - T23J06 - + - - T23M11 - + - - T23O06 - + - - T24D06 - + - - - T24E12 - + - - - T24F06 - + - - T24J10 - + - - T24K23 - + - - T25D17 - + - - T25D18 - + - - T25K13 - + - - T26D18 - + - - T26H19 - + - - T26I19 - + - - T26J13 - + + - - T26L13 - + - - T26M23 - + + - - T27E06 - + - - T27H19 - + - - T27J02 - + - - T28E11 - + + - - T29D05 - + + - - T29D24 - + + - - T29E20 - + - - T29J09 - + - - T29J10 - + + - - T29K08 - + - - T29L21 - + + - - T29P05 - + - - T29P06 - + + - - T30D23 - + + - - T30E21 - + + - - T30P05 - + - - T30P19 - + + - - T31J09 - + - - T31K07 - + - - T31K12 - + - - T32B05 - + - - T32G06 - + + - - T32K08 - + - - T32K12 - + - - T11A07 - + + + + - - - T02A17 - - + - - - - T02I02 - - + - - - - T03A23 - - + - - - - T04I02 - - + - - - - T10K17 - - + + - - - T11H12 - - + - - - T01E14 - - + - + - - - T02J02 - - + + + + - - T03F08 - - + - + - - - T04A16 - - + + + + - - T06D20 - - + + + + - - T08O24 - - + + + + - - T04F14 - - - + + - - T04F15 - - - + - - - T04G14 - - - + - - - T06A18 - - - + + - - T07J22 - - - + + - - T08O20 - - - + + - - T09D15 - - - + + - - T09E20 - - - + + - - T01B15 - - - + + + + - T01O24 - - - + + + + - T02K24 - - - + + + + - T04N20 - - - + + + + - T06E09 - - - + + + + - T06P16 - - - + + + + - T01G03 - - - - + - - T04F07 - - - - + - T04I14 - - - - + + - T05H10 - - - - + + - T05O10 - - - - + - - T07G04 - - - - + - - T08A12 - - - - + - - T08C05 - - - - + - - T08D06 - - - - + + - T09J16 - - - - + + - T09M10 - - - - + - - T10A10 - - - - + + - T10C13 - - - - + - T10I05 - - - - + + - T10P14 - - - - + + - T10P15 - - - - + + - T13C05 - - + + - T13E13 - - + + - T14B13 - - + + - T15I24 - - + + - T16F23 - - + - - T18B20 - - + + - T18D08 - - + + - T19H13 - - + + - T19O12 - - + + - T21E22 - - + + - T21L10 - - + + - T23C18 - - + + - T24A09 - - + + - T24C07 - - + + - T24N04 - - + + - T25H04 - - + + - T25L18 - - + + - T27C05 - - + + - T27G19 - - + + - T27M05 - - + + - T28I16 - - + + - T29C06 - - + + - T29L23 - - + + - T29M05 - - + + - T31J04 - - + - T02A07 - - - - + + + T02C11 - - - - + + + T04O06 - - - - + - + T05C24 - - - - + - + - T07O03 - - - - + + + + T08B12 - - - - + + + T08M12 - - - - + + + + T14H12 - - + + + + T23J19 - - + + + + T23K10 - - + + + + T01B07 - - - - - + T01D11 - - - - - + T01E06 - - - - - + T01I19 - - - - - + T02A02 - - - - - + T02C21 - - - - - + T02H19 - - - - - + T02I19 - - - - - + + T02J05 - - - - - + T02L02 - - - - - + T03B11 - - - - - + + T03B18 - - - - - + T03H12 - - - - - + T04B01 - - - - - + T04C08 - - - - - + T04C19 - - - - - + T04C21 - - - - - + T04E19 - - - - - + + T04G07 - - - - - + + T04J14 - - - - - + T04K01 - - - - - + T04K05 - - - - - + T04M18 - - - - - + + T04O18 - - - - - + + T05C08 - - - - - + T05C16 - - - - - + T05C22 - - - - - + T05D14 - - - - - + T05D20 - - - - - + T05E15 - - - - - + T05F12 - - - - - + T05G17 - - - - - + T05H01 - - - - - + T05O09 - - - - - + T06A23 - - - - - + T06C12 - - - - - + T06C18 - - - - - + T06H14 - - - - - + T07B06 - - - - - + + T07D19 - - - - - + T07E08 - - - - - + + T07F06 - - - - - + T08B07 - - - - - + T08P01 - - - - - + T09D20 - - - - - + T09E17 - - - - - + + T09I15 - - - - - + + T09J15 - - - - - + T09K11 - - - - - + T09N19 - - - - - + + T10A11 - - - - - + T10E03 - - - - - + + T13A03 - - - + T13E15 - - - + + T13G06 - - - + T13I03 - - - + T13I19 - - - + + T13K03 - - - + + T13L13 - - - + + T13M11 - - - + T14C16 - - - + T14F13 - - - + + T14N01 - - - + + T14N07 - - - + T14P01 - - - + + T16I19 - - - + T17I15 - - - + T17I16 - - - + T17J07 - - - + T17K13 - - - + + T17L19 - - - + + T18D16 - - - + T18N03 - - - + + T19J16 - - - + - T20O13 - - - + T21C03 - - - + + T21G14 - - - + T23G14 - - - + T23J09 - - - + + T23M18 - - - + + T23N24 - - - + + T24D04 - - - + T25F06 - - - + T25M20 - - - + T26I15 - - - + T26I19 - - - + T27C20 - - - + + T27J08 - - - + T27P12 - - - + + T27P18 - - - + + T28C14 - - - + + T28D06 - - - + + T28E05 - - - + + T28K13 - - - + T29C09 - - - + - T29C23 - - - + T29P01 - - - + + T30D09 - - - + T30F20 - - - + T30H06 - - - + - T31J07 - - - + - T32C19 - - - +